Package: hatchR 1.0.1.9000

hatchR: Predict Fish Hatch and Emergence Timing
Predict hatch and emergence timing for a wide range of wild fishes using the effective value framework (Sparks et al., (2019) <doi:10.1139/cjfas-2017-0468>). 'hatchR' offers users access to established phenological models and the flexibility to incorporate custom parameterizations using external datasets.
Authors:
hatchR_1.0.1.9000.tar.gz
hatchR_1.0.1.9000.zip(r-4.7)hatchR_1.0.1.9000.zip(r-4.6)hatchR_1.0.1.9000.zip(r-4.5)
hatchR_1.0.1.9000.tgz(r-4.6-any)hatchR_1.0.1.9000.tgz(r-4.5-any)
hatchR_1.0.1.9000.tar.gz(r-4.7-any)hatchR_1.0.1.9000.tar.gz(r-4.6-any)
hatchR_1.0.1.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
hatchR/json (API)
| # Install 'hatchR' in R: |
| install.packages('hatchR', repos = c('https://bmait101.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/bmait101/hatchr/issues
Pkgdown/docs site:https://bmait101.github.io
- crooked_river - Example dataset: Crooked River, Idaho
- idaho - Central Idaho Water Temperature Data
- model_table - Table of phenology models
- woody_island - Example dataset: Woody Island, Lake Iliamna, Alaska
Last updated from:efb8c0e8d0. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 158 | ||
| source / vignettes | OK | 277 | ||
| linux-release-x86_64 | OK | 119 | ||
| macos-release-arm64 | OK | 171 | ||
| macos-oldrel-arm64 | OK | 138 | ||
| windows-devel | OK | 92 | ||
| windows-release | OK | 157 | ||
| windows-oldrel | OK | 100 | ||
| wasm-release | OK | 124 |
Exports:check_continuousfit_modelmodel_selectplot_check_tempplot_phenologypredict_phenologypredict_spawnsummarize_temp
Dependencies:clicommonmarkcpp11curldplyrfarvergenericsggplot2ggtextgluegridtextgtableisobandjpeglabelinglifecyclelitedownlubridatemagrittrmarkdownpillarpkgconfigpngR6RColorBrewerRcpprlangS7scalesstringistringrtibbletidyselecttimechangeutf8vctrsviridisLitewithrxfunxml2
Last update: 2025-08-13
Started: 2025-04-25
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Last update: 2025-04-25
Started: 2024-11-20
Last update: 2025-04-25
Started: 2024-11-20
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Started: 2024-11-22
Last update: 2025-02-07
Started: 2024-11-18
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Check if the dates in a data frame are continuous. | check_continuous |
| Example dataset: Crooked River, Idaho | crooked_river |
| Fit B&M model 2 to new data using 'stats::nls()' | fit_model |
| Central Idaho Water Temperature Data | idaho |
| Select a development model structure | model_select |
| Table of phenology models | model_table |
| Visual check of imported temperature data | plot_check_temp |
| Visualize fish phenology | plot_phenology |
| Predict phenology of fish | predict_phenology |
| Predict spawning of fish | predict_spawn |
| Summarize temperature data to daily values | summarize_temp |
| Example dataset: Woody Island, Lake Iliamna, Alaska | woody_island |
